Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga3Q91XY5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gm7860-201ENSMUST00000121190 879 ntBASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga3Q91XY5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga3Q91XY5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.49■□□□□ 0.23
Pcdhga3Q91XY5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga3Q91XY5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga3Q91XY5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Gm9988-201ENSMUST00000069786 435 ntBASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhga3Q91XY5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.46■□□□□ 0.22
Pcdhga3Q91XY5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Pcdhga3Q91XY5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 BC021767-201ENSMUST00000126387 1716 ntBASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga3Q91XY5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms