Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga4Q91XY4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga4Q91XY4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhga4Q91XY4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhga4Q91XY4 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.21■□□□□ 0.5
Pcdhga4Q91XY4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Gm13534-201ENSMUST00000121169 513 ntBASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga4Q91XY4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga4Q91XY4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga4Q91XY4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.17■□□□□ 0.5
Pcdhga4Q91XY4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga4Q91XY4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms