Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc5Q91XW9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc5Q91XW9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Gm12896-201ENSMUST00000118430 226 ntBASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc5Q91XW9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc5Q91XW9 Gm7860-201ENSMUST00000121190 879 ntBASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgc5Q91XW9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc5Q91XW9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhgc5Q91XW9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc5Q91XW9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms