Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.13■□□□□ 0.65
Lims2Q91XD2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lims2Q91XD2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.12■□□□□ 0.65
Lims2Q91XD2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.12■□□□□ 0.65
Lims2Q91XD2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lims2Q91XD2 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.11■□□□□ 0.65
Lims2Q91XD2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lims2Q91XD2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.1■□□□□ 0.65
Lims2Q91XD2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lims2Q91XD2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.09■□□□□ 0.65
Lims2Q91XD2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lims2Q91XD2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Lims2Q91XD2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lims2Q91XD2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lims2Q91XD2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Dio3-201ENSMUST00000097228 1449 ntBASIC19.08■□□□□ 0.64
Lims2Q91XD2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lims2Q91XD2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.07■□□□□ 0.64
Lims2Q91XD2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms