Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.83■□□□□ 0.77
TraipQ8VIG6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.83■□□□□ 0.77
TraipQ8VIG6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TraipQ8VIG6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TraipQ8VIG6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TraipQ8VIG6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TraipQ8VIG6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Gm10812-201ENSMUST00000099864 546 ntBASIC19.82■□□□□ 0.76
TraipQ8VIG6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
TraipQ8VIG6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Flg-201ENSMUST00000050758 1488 ntBASIC19.81■□□□□ 0.76
TraipQ8VIG6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.81■□□□□ 0.76
TraipQ8VIG6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TraipQ8VIG6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.8■□□□□ 0.76
TraipQ8VIG6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TraipQ8VIG6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TraipQ8VIG6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TraipQ8VIG6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TraipQ8VIG6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TraipQ8VIG6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TraipQ8VIG6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Gm13158-201ENSMUST00000122007 736 ntBASIC19.76■□□□□ 0.75
TraipQ8VIG6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TraipQ8VIG6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Gm10252-201ENSMUST00000209541 832 ntBASIC19.75■□□□□ 0.75
TraipQ8VIG6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.75■□□□□ 0.75
TraipQ8VIG6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms