Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cspg4Q8VHY0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cspg4Q8VHY0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cspg4Q8VHY0 Gm14859-201ENSMUST00000117752 357 ntBASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cspg4Q8VHY0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 AA414768-201ENSMUST00000121924 1257 ntBASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cspg4Q8VHY0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Gm18025-201ENSMUST00000221733 862 ntBASIC16■□□□□ 0.15
Cspg4Q8VHY0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16■□□□□ 0.15
Cspg4Q8VHY0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms