Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh18Q8VHR0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh18Q8VHR0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh18Q8VHR0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdh18Q8VHR0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh18Q8VHR0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh18Q8VHR0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh18Q8VHR0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh18Q8VHR0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh18Q8VHR0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh18Q8VHR0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh18Q8VHR0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh18Q8VHR0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 151.1 ms