Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc71Q8VEG0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Mir5122-201ENSMUST00000175004 89 ntBASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71Q8VEG0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71Q8VEG0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc71Q8VEG0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc71Q8VEG0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Zfp783-201ENSMUST00000095946 670 ntBASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71Q8VEG0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Gm11643-201ENSMUST00000119578 864 ntBASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Mtag2-201ENSMUST00000058665 714 ntBASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71Q8VEG0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71Q8VEG0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms