Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps39Q8R5L3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps39Q8R5L3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps39Q8R5L3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps39Q8R5L3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps39Q8R5L3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps39Q8R5L3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps39Q8R5L3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps39Q8R5L3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps39Q8R5L3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.58■□□□□ 0.57
Vps39Q8R5L3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms