Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdt1Q8R4E9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdt1Q8R4E9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.94■□□□□ 0.46
Cdt1Q8R4E9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdt1Q8R4E9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdt1Q8R4E9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdt1Q8R4E9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdt1Q8R4E9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms