Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp2a1Q8R429 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp2a1Q8R429 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.79■□□□□ 0.92
Atp2a1Q8R429 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atp2a1Q8R429 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp2a1Q8R429 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.78■□□□□ 0.92
Atp2a1Q8R429 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp2a1Q8R429 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atp2a1Q8R429 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atp2a1Q8R429 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.77■□□□□ 0.91
Atp2a1Q8R429 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Gm12896-201ENSMUST00000118430 226 ntBASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp2a1Q8R429 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Gm27275-201ENSMUST00000184318 272 ntBASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Gm44549-201ENSMUST00000208351 577 ntBASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Atp2a1Q8R429 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Gm2559-201ENSMUST00000201323 363 ntBASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Dio3-201ENSMUST00000097228 1449 ntBASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp2a1Q8R429 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atp2a1Q8R429 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Gm10252-201ENSMUST00000209541 832 ntBASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp2a1Q8R429 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.71■□□□□ 0.91
Atp2a1Q8R429 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms