Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slf1Q8R3P9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.77■□□□□ 0.59
Slf1Q8R3P9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slf1Q8R3P9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slf1Q8R3P9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slf1Q8R3P9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slf1Q8R3P9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slf1Q8R3P9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slf1Q8R3P9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Slf1Q8R3P9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms