Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Chmp7Q8R1T1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chmp7Q8R1T1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 AC107452.1-201ENSMUST00000227963 481 ntBASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chmp7Q8R1T1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Gm22325-201ENSMUST00000158904 308 ntBASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chmp7Q8R1T1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Gm11927-201ENSMUST00000118472 759 ntBASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chmp7Q8R1T1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Chmp7Q8R1T1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Chmp7Q8R1T1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Chmp7Q8R1T1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chmp7Q8R1T1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Mir1199-201ENSMUST00000117015 119 ntBASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chmp7Q8R1T1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Chmp7Q8R1T1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms