Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim2Q8R1G6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pdlim2Q8R1G6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim2Q8R1G6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim2Q8R1G6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim2Q8R1G6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim2Q8R1G6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim2Q8R1G6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Gm45444-201ENSMUST00000211394 898 ntBASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim2Q8R1G6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim2Q8R1G6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
Pdlim2Q8R1G6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pdlim2Q8R1G6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.39■■□□□ 1.02
Pdlim2Q8R1G6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Gm12366-201ENSMUST00000121722 873 ntBASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Gm5786-201ENSMUST00000085368 882 ntBASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim2Q8R1G6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms