Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sf3a1Q8K4Z5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sf3a1Q8K4Z5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.74■■□□□ 1.23
Sf3a1Q8K4Z5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Sf3a1Q8K4Z5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Gm6365-201ENSMUST00000054711 744 ntBASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sf3a1Q8K4Z5 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sf3a1Q8K4Z5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sf3a1Q8K4Z5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sf3a1Q8K4Z5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sf3a1Q8K4Z5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Sf3a1Q8K4Z5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sf3a1Q8K4Z5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sf3a1Q8K4Z5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Sf3a1Q8K4Z5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm7290-201ENSMUST00000104990 617 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm12933-201ENSMUST00000120203 872 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm12918-201ENSMUST00000120234 636 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm15710-201ENSMUST00000121821 636 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm5075-201ENSMUST00000196916 622 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sf3a1Q8K4Z5 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms