Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col23a1Q8K4G2 Gm12382-201ENSMUST00000122005 922 ntBASIC22.83■■□□□ 1.25
Col23a1Q8K4G2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col23a1Q8K4G2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Col23a1Q8K4G2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.82■■□□□ 1.24
Col23a1Q8K4G2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Gm45058-201ENSMUST00000205810 766 ntBASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col23a1Q8K4G2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col23a1Q8K4G2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
Col23a1Q8K4G2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col23a1Q8K4G2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col23a1Q8K4G2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Col23a1Q8K4G2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Gm14859-201ENSMUST00000117752 357 ntBASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col23a1Q8K4G2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Col23a1Q8K4G2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col23a1Q8K4G2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col23a1Q8K4G2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col23a1Q8K4G2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col23a1Q8K4G2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Gm17971-201ENSMUST00000190239 806 ntBASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col23a1Q8K4G2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms