Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Serp2-204ENSMUST00000228055 705 ntBASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cnot6Q8K3P5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Smad6-203ENSMUST00000179458 273 ntBASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot6Q8K3P5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.19■□□□□ 0.5
Cnot6Q8K3P5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cnot6Q8K3P5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot6Q8K3P5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.16■□□□□ 0.5
Cnot6Q8K3P5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Gm43017-201ENSMUST00000198296 752 ntBASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot6Q8K3P5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms