Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Smc4Q8CG47 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Smc4Q8CG47 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.95■■□□□ 1.26
Smc4Q8CG47 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Smc4Q8CG47 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.95■■□□□ 1.26
Smc4Q8CG47 Gm44549-201ENSMUST00000208351 577 ntBASIC22.95■■□□□ 1.26
Smc4Q8CG47 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smc4Q8CG47 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Gm2559-201ENSMUST00000201323 363 ntBASIC22.94■■□□□ 1.26
Smc4Q8CG47 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Smc4Q8CG47 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Gm37856-201ENSMUST00000191634 999 ntBASIC22.93■■□□□ 1.26
Smc4Q8CG47 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smc4Q8CG47 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smc4Q8CG47 Trmt13-210ENSMUST00000198454 880 ntBASIC22.92■■□□□ 1.26
Smc4Q8CG47 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smc4Q8CG47 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smc4Q8CG47 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smc4Q8CG47 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smc4Q8CG47 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.91■■□□□ 1.26
Smc4Q8CG47 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Smc4Q8CG47 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smc4Q8CG47 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smc4Q8CG47 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Gm12896-201ENSMUST00000118430 226 ntBASIC22.9■■□□□ 1.26
Smc4Q8CG47 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Gm22240-201ENSMUST00000175225 82 ntBASIC22.9■■□□□ 1.26
Smc4Q8CG47 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Smc4Q8CG47 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Smc4Q8CG47 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Smc4Q8CG47 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
Smc4Q8CG47 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Smc4Q8CG47 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.89■■□□□ 1.25
Smc4Q8CG47 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smc4Q8CG47 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.89■■□□□ 1.25
Smc4Q8CG47 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smc4Q8CG47 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.88■■□□□ 1.25
Smc4Q8CG47 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smc4Q8CG47 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.87■■□□□ 1.25
Smc4Q8CG47 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Smc4Q8CG47 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.86■■□□□ 1.25
Smc4Q8CG47 Gm13168-201ENSMUST00000121771 632 ntBASIC22.86■■□□□ 1.25
Smc4Q8CG47 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.86■■□□□ 1.25
Smc4Q8CG47 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smc4Q8CG47 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.85■■□□□ 1.25
Smc4Q8CG47 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Smc4Q8CG47 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms