Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf2tQ8C7E9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cstf2tQ8C7E9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Cstf2tQ8C7E9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf2tQ8C7E9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf2tQ8C7E9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Mir5122-201ENSMUST00000175004 89 ntBASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Cstf2tQ8C7E9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf2tQ8C7E9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf2tQ8C7E9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Gm18666-201ENSMUST00000190039 958 ntBASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.96■□□□□ 0.63
Cstf2tQ8C7E9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf2tQ8C7E9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms