Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Smim4Q8C1Q6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smim4Q8C1Q6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim4Q8C1Q6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim4Q8C1Q6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim4Q8C1Q6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Gm26833-201ENSMUST00000180899 440 ntBASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim4Q8C1Q6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smim4Q8C1Q6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms