Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps9d1Q8C190 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Vps9d1Q8C190 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Gm8493-201ENSMUST00000196881 489 ntBASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Vps9d1Q8C190 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps9d1Q8C190 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps9d1Q8C190 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps9d1Q8C190 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Gm43017-201ENSMUST00000198296 752 ntBASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps9d1Q8C190 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms