Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Gm10033-202ENSMUST00000211874 928 ntBASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf3Q8C120 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf3Q8C120 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf3Q8C120 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gm13534-201ENSMUST00000121169 513 ntBASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gm18284-201ENSMUST00000172604 624 ntBASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gm42642-201ENSMUST00000200683 355 ntBASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.35■□□□□ 0.69
Sh3rf3Q8C120 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Gm26571-201ENSMUST00000181399 666 ntBASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf3Q8C120 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf3Q8C120 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf3Q8C120 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf3Q8C120 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf3Q8C120 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms