Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TnrQ8BYI9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC24.31■■□□□ 1.48
TnrQ8BYI9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.31■■□□□ 1.48
TnrQ8BYI9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TnrQ8BYI9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Gm15375-201ENSMUST00000119510 849 ntBASIC24.3■■□□□ 1.48
TnrQ8BYI9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TnrQ8BYI9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TnrQ8BYI9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
TnrQ8BYI9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Gm30025-201ENSMUST00000218555 728 ntBASIC24.28■■□□□ 1.48
TnrQ8BYI9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
TnrQ8BYI9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Gm42545-201ENSMUST00000202755 922 ntBASIC24.27■■□□□ 1.48
TnrQ8BYI9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
TnrQ8BYI9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TnrQ8BYI9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC24.25■■□□□ 1.47
TnrQ8BYI9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC24.25■■□□□ 1.47
TnrQ8BYI9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Gm37292-201ENSMUST00000192062 758 ntBASIC24.24■■□□□ 1.47
TnrQ8BYI9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TnrQ8BYI9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.24■■□□□ 1.47
TnrQ8BYI9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Gm13559-201ENSMUST00000120476 863 ntBASIC24.23■■□□□ 1.47
TnrQ8BYI9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Gm38285-201ENSMUST00000192928 922 ntBASIC24.23■■□□□ 1.47
TnrQ8BYI9 Gm3375-201ENSMUST00000203929 796 ntBASIC24.23■■□□□ 1.47
TnrQ8BYI9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Odf3b-204ENSMUST00000227834 930 ntBASIC24.23■■□□□ 1.47
TnrQ8BYI9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TnrQ8BYI9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TnrQ8BYI9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC24.22■■□□□ 1.47
TnrQ8BYI9 Gm11539-201ENSMUST00000119837 557 ntBASIC24.22■■□□□ 1.47
TnrQ8BYI9 Gm13436-201ENSMUST00000120418 567 ntBASIC24.22■■□□□ 1.47
TnrQ8BYI9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms