Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.78□□□□□ -0.04
Chd9Q8BYH8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chd9Q8BYH8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Gm5186-201ENSMUST00000218781 920 ntBASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd9Q8BYH8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Gm21814-202ENSMUST00000203277 873 ntBASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd9Q8BYH8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Gm6623-201ENSMUST00000173570 544 ntBASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.76□□□□□ -0.05
Chd9Q8BYH8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd9Q8BYH8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Gm17661-201ENSMUST00000170317 270 ntBASIC14.75□□□□□ -0.05
Chd9Q8BYH8 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Gm18959-201ENSMUST00000208954 655 ntBASIC14.75□□□□□ -0.05
Chd9Q8BYH8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd9Q8BYH8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Gm13158-201ENSMUST00000122007 736 ntBASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd9Q8BYH8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Gm7860-201ENSMUST00000121190 879 ntBASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd9Q8BYH8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Gm17807-201ENSMUST00000186869 298 ntBASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Gm18032-201ENSMUST00000222541 538 ntBASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd9Q8BYH8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms