Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.6■□□□□ 0.89
Cc2d1bQ8BRN9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cc2d1bQ8BRN9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cc2d1bQ8BRN9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cc2d1bQ8BRN9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.58■□□□□ 0.88
Cc2d1bQ8BRN9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cc2d1bQ8BRN9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cc2d1bQ8BRN9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cc2d1bQ8BRN9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cc2d1bQ8BRN9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Gm9988-201ENSMUST00000069786 435 ntBASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cc2d1bQ8BRN9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cc2d1bQ8BRN9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cc2d1bQ8BRN9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cc2d1bQ8BRN9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.52■□□□□ 0.88
Cc2d1bQ8BRN9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cc2d1bQ8BRN9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.52■□□□□ 0.87
Cc2d1bQ8BRN9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cc2d1bQ8BRN9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms