Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ckap4Q8BMK4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Gm43173-201ENSMUST00000202246 593 ntBASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ckap4Q8BMK4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ckap4Q8BMK4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ckap4Q8BMK4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ckap4Q8BMK4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.58■□□□□ 0.41
Ckap4Q8BMK4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ckap4Q8BMK4 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Smad6-203ENSMUST00000179458 273 ntBASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ckap4Q8BMK4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ckap4Q8BMK4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ckap4Q8BMK4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ckap4Q8BMK4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap4Q8BMK4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms