Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdkl3Q8BLF2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdkl3Q8BLF2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdkl3Q8BLF2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdkl3Q8BLF2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl3Q8BLF2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl3Q8BLF2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cdkl3Q8BLF2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Gm5921-201ENSMUST00000075898 882 ntBASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl3Q8BLF2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Mir6236-201ENSMUST00000184437 123 ntBASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl3Q8BLF2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl3Q8BLF2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms