Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gm21956-201ENSMUST00000179946 522 ntBASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gm27801-201ENSMUST00000184174 223 ntBASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Mir7075-201ENSMUST00000184187 82 ntBASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdhr3Q8BL00 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cdhr3Q8BL00 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdhr3Q8BL00 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdhr3Q8BL00 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cdhr3Q8BL00 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Gm43173-201ENSMUST00000202246 593 ntBASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdhr3Q8BL00 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Gm13241-201ENSMUST00000094493 780 ntBASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdhr3Q8BL00 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms