Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm4Q8BKA3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm4Q8BKA3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.09■□□□□ 0.17
Srrm4Q8BKA3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm4Q8BKA3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gm6420-201ENSMUST00000193885 723 ntBASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm4Q8BKA3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm4Q8BKA3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm4Q8BKA3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm4Q8BKA3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms