Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop53Q8BK35 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop53Q8BK35 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop53Q8BK35 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nop53Q8BK35 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop53Q8BK35 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Nop53Q8BK35 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop53Q8BK35 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
Nop53Q8BK35 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop53Q8BK35 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Gm7860-201ENSMUST00000121190 879 ntBASIC19.85■□□□□ 0.77
Nop53Q8BK35 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nop53Q8BK35 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Gm27801-201ENSMUST00000184174 223 ntBASIC19.84■□□□□ 0.77
Nop53Q8BK35 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.84■□□□□ 0.77
Nop53Q8BK35 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nop53Q8BK35 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nop53Q8BK35 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms