Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcal1Q8BJL0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcal1Q8BJL0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smarcal1Q8BJL0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcal1Q8BJL0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarcal1Q8BJL0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Gm11927-201ENSMUST00000118472 759 ntBASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcal1Q8BJL0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Smarcal1Q8BJL0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcal1Q8BJL0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcal1Q8BJL0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcal1Q8BJL0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcal1Q8BJL0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcal1Q8BJL0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcal1Q8BJL0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarcal1Q8BJL0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcal1Q8BJL0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms