Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh20Q8BIZ0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh20Q8BIZ0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh20Q8BIZ0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh20Q8BIZ0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh20Q8BIZ0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdh20Q8BIZ0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh20Q8BIZ0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdh20Q8BIZ0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh20Q8BIZ0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdh20Q8BIZ0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh20Q8BIZ0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh20Q8BIZ0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh20Q8BIZ0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh20Q8BIZ0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh20Q8BIZ0 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Gm42778-201ENSMUST00000199644 553 ntBASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms