Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.31■□□□□ 0.68
Ccdc40Q8BI79 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc40Q8BI79 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc40Q8BI79 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc40Q8BI79 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc40Q8BI79 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ccdc40Q8BI79 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc40Q8BI79 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms