Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Npas4Q8BGD7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npas4Q8BGD7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npas4Q8BGD7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.69■□□□□ 0.74
Npas4Q8BGD7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas4Q8BGD7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas4Q8BGD7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Npas4Q8BGD7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Gm11643-201ENSMUST00000119578 864 ntBASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Npas4Q8BGD7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npas4Q8BGD7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npas4Q8BGD7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npas4Q8BGD7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npas4Q8BGD7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms