Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox21Q811W0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Gm7290-201ENSMUST00000104990 617 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Gm12918-201ENSMUST00000120234 636 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Gm15710-201ENSMUST00000121821 636 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Gm5075-201ENSMUST00000196916 622 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.18■□□□□ 0.02
Sox21Q811W0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Sox21Q811W0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox21Q811W0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox21Q811W0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox21Q811W0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox21Q811W0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox21Q811W0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox21Q811W0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox21Q811W0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sox21Q811W0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sox21Q811W0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox21Q811W0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox21Q811W0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox21Q811W0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox21Q811W0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox21Q811W0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.15■□□□□ 0.02
Sox21Q811W0 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.15■□□□□ 0.02
Sox21Q811W0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox21Q811W0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sox21Q811W0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox21Q811W0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox21Q811W0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Sox21Q811W0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox21Q811W0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.14■□□□□ 0.01
Sox21Q811W0 Gm20049-201ENSMUST00000219950 730 ntBASIC15.14■□□□□ 0.01
Sox21Q811W0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox21Q811W0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sox21Q811W0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms