Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trnp1Q80ZI1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trnp1Q80ZI1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trnp1Q80ZI1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trnp1Q80ZI1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trnp1Q80ZI1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trnp1Q80ZI1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Gm42545-201ENSMUST00000202755 922 ntBASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Gm3375-201ENSMUST00000203929 796 ntBASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trnp1Q80ZI1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trnp1Q80ZI1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Gm37292-201ENSMUST00000192062 758 ntBASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.12■□□□□ 0.97
Trnp1Q80ZI1 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnp1Q80ZI1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trnp1Q80ZI1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trnp1Q80ZI1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnp1Q80ZI1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trnp1Q80ZI1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trnp1Q80ZI1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trnp1Q80ZI1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trnp1Q80ZI1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trnp1Q80ZI1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trnp1Q80ZI1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.07■□□□□ 0.96
Trnp1Q80ZI1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trnp1Q80ZI1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms