Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nrde2Q80XC6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nrde2Q80XC6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nrde2Q80XC6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nrde2Q80XC6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Gm7977-201ENSMUST00000193787 748 ntBASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nrde2Q80XC6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nrde2Q80XC6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nrde2Q80XC6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Gm13836-201ENSMUST00000121159 501 ntBASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nrde2Q80XC6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.77■□□□□ 0.6
Nrde2Q80XC6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nrde2Q80XC6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nrde2Q80XC6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Nrde2Q80XC6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nrde2Q80XC6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nrde2Q80XC6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.76■□□□□ 0.59
Nrde2Q80XC6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms