Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.82■□□□□ 0.44
Otop1Q80VM9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.82■□□□□ 0.44
Otop1Q80VM9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.82■□□□□ 0.44
Otop1Q80VM9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.82■□□□□ 0.44
Otop1Q80VM9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.82■□□□□ 0.44
Otop1Q80VM9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.82■□□□□ 0.44
Otop1Q80VM9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.81■□□□□ 0.44
Otop1Q80VM9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.81■□□□□ 0.44
Otop1Q80VM9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Otop1Q80VM9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Otop1Q80VM9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Otop1Q80VM9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Otop1Q80VM9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Otop1Q80VM9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.77■□□□□ 0.44
Otop1Q80VM9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.77■□□□□ 0.44
Otop1Q80VM9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.77■□□□□ 0.44
Otop1Q80VM9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.77■□□□□ 0.44
Otop1Q80VM9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Otop1Q80VM9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Otop1Q80VM9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.77■□□□□ 0.43
Otop1Q80VM9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Otop1Q80VM9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms