Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Trim62Q80V85 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim62Q80V85 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim62Q80V85 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim62Q80V85 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim62Q80V85 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim62Q80V85 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim62Q80V85 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim62Q80V85 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim62Q80V85 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trim62Q80V85 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim62Q80V85 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.26■□□□□ 0.67
Trim62Q80V85 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim62Q80V85 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim62Q80V85 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trim62Q80V85 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim62Q80V85 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim62Q80V85 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim62Q80V85 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim62Q80V85 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 BC021767-201ENSMUST00000126387 1716 ntBASIC19.25■□□□□ 0.67
Trim62Q80V85 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim62Q80V85 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim62Q80V85 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim62Q80V85 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim62Q80V85 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim62Q80V85 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim62Q80V85 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.23■□□□□ 0.67
Trim62Q80V85 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim62Q80V85 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim62Q80V85 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim62Q80V85 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim62Q80V85 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim62Q80V85 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim62Q80V85 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.22■□□□□ 0.67
Trim62Q80V85 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.22■□□□□ 0.67
Trim62Q80V85 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim62Q80V85 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.22■□□□□ 0.67
Trim62Q80V85 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim62Q80V85 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim62Q80V85 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim62Q80V85 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim62Q80V85 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim62Q80V85 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Trim62Q80V85 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim62Q80V85 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.19■□□□□ 0.66
Trim62Q80V85 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim62Q80V85 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms