Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Lca5Q80ST9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Gm44549-201ENSMUST00000208351 577 ntBASIC21.27■■□□□ 1
Lca5Q80ST9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lca5Q80ST9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lca5Q80ST9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lca5Q80ST9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.26■□□□□ 0.99
Lca5Q80ST9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.26■□□□□ 0.99
Lca5Q80ST9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.26■□□□□ 0.99
Lca5Q80ST9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lca5Q80ST9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lca5Q80ST9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Gm27011-201ENSMUST00000182352 972 ntBASIC21.24■□□□□ 0.99
Lca5Q80ST9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lca5Q80ST9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Gm22325-201ENSMUST00000158904 308 ntBASIC21.23■□□□□ 0.99
Lca5Q80ST9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.23■□□□□ 0.99
Lca5Q80ST9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lca5Q80ST9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lca5Q80ST9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.22■□□□□ 0.99
Lca5Q80ST9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lca5Q80ST9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.21■□□□□ 0.99
Lca5Q80ST9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lca5Q80ST9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.21■□□□□ 0.99
Lca5Q80ST9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lca5Q80ST9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms