Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vma21Q78T54 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vma21Q78T54 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vma21Q78T54 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vma21Q78T54 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vma21Q78T54 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vma21Q78T54 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vma21Q78T54 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.14■□□□□ 0.01
Vma21Q78T54 Gm12251-201ENSMUST00000117893 792 ntBASIC15.14■□□□□ 0.01
Vma21Q78T54 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Gm13241-201ENSMUST00000094493 780 ntBASIC15.14■□□□□ 0.01
Vma21Q78T54 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vma21Q78T54 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21Q78T54 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.14■□□□□ 0.01
Vma21Q78T54 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.13■□□□□ 0.01
Vma21Q78T54 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Vma21Q78T54 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vma21Q78T54 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21Q78T54 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vma21Q78T54 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.12■□□□□ 0.01
Vma21Q78T54 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.12■□□□□ 0.01
Vma21Q78T54 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.12■□□□□ 0.01
Vma21Q78T54 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.12■□□□□ 0.01
Vma21Q78T54 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21Q78T54 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Gm7860-201ENSMUST00000121190 879 ntBASIC15.11■□□□□ 0.01
Vma21Q78T54 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vma21Q78T54 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21Q78T54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vma21Q78T54 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.1■□□□□ 0.01
Vma21Q78T54 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vma21Q78T54 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vma21Q78T54 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.1■□□□□ 0.01
Vma21Q78T54 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Vma21Q78T54 Smad6-203ENSMUST00000179458 273 ntBASIC15.1■□□□□ 0.01
Vma21Q78T54 Gm27801-201ENSMUST00000184174 223 ntBASIC15.1■□□□□ 0.01
Vma21Q78T54 Mir7075-201ENSMUST00000184187 82 ntBASIC15.1■□□□□ 0.01
Vma21Q78T54 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.1■□□□□ 0.01
Vma21Q78T54 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21Q78T54 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms