Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Trmt13-210ENSMUST00000198454 880 ntBASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubfd1Q78JW9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubfd1Q78JW9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubfd1Q78JW9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubfd1Q78JW9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Gm13168-201ENSMUST00000121771 632 ntBASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubfd1Q78JW9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubfd1Q78JW9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ubfd1Q78JW9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubfd1Q78JW9 Dio3-201ENSMUST00000097228 1449 ntBASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubfd1Q78JW9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubfd1Q78JW9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubfd1Q78JW9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms