Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rif1Q6PR54 Auts2-212ENSMUST00000178555 309 ntBASIC15.7■□□□□ 0.1
Rif1Q6PR54 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rif1Q6PR54 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rif1Q6PR54 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.7■□□□□ 0.1
Rif1Q6PR54 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rif1Q6PR54 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.69■□□□□ 0.1
Rif1Q6PR54 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Mir8098-201ENSMUST00000184011 137 ntBASIC15.69■□□□□ 0.1
Rif1Q6PR54 Gm3375-201ENSMUST00000203929 796 ntBASIC15.69■□□□□ 0.1
Rif1Q6PR54 Birc2-201ENSMUST00000054878 378 ntBASIC15.69■□□□□ 0.1
Rif1Q6PR54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rif1Q6PR54 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rif1Q6PR54 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Mir3081-201ENSMUST00000175305 84 ntBASIC15.67■□□□□ 0.1
Rif1Q6PR54 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rif1Q6PR54 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Gm27459-201ENSMUST00000184860 107 ntBASIC15.66■□□□□ 0.1
Rif1Q6PR54 Gm34391-201ENSMUST00000203706 907 ntBASIC15.66■□□□□ 0.1
Rif1Q6PR54 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.66■□□□□ 0.1
Rif1Q6PR54 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rif1Q6PR54 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Gm18733-201ENSMUST00000173950 856 ntBASIC15.65■□□□□ 0.1
Rif1Q6PR54 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.65■□□□□ 0.1
Rif1Q6PR54 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.65■□□□□ 0.1
Rif1Q6PR54 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rif1Q6PR54 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms