Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc46a1Q6PEM8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a1Q6PEM8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Gm26524-201ENSMUST00000192339 390 ntBASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a1Q6PEM8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a1Q6PEM8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Rab3c-203ENSMUST00000224180 967 ntBASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Slc46a1Q6PEM8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Slc46a1Q6PEM8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Slc46a1Q6PEM8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a1Q6PEM8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a1Q6PEM8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms