Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC24.57■■□□□ 1.52
Chd4Q6PDQ2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Gm18025-201ENSMUST00000221733 862 ntBASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Hsf1-204ENSMUST00000226872 2104 ntBASIC24.56■■□□□ 1.52
Chd4Q6PDQ2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Chd4Q6PDQ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Chd4Q6PDQ2 Gm13836-201ENSMUST00000121159 501 ntBASIC24.55■■□□□ 1.52
Chd4Q6PDQ2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC24.55■■□□□ 1.52
Chd4Q6PDQ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Chd4Q6PDQ2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chd4Q6PDQ2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Flg-201ENSMUST00000050758 1488 ntBASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chd4Q6PDQ2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.52■■□□□ 1.52
Chd4Q6PDQ2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Gm43799-201ENSMUST00000201845 579 ntBASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
Chd4Q6PDQ2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Chd4Q6PDQ2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Gm37805-201ENSMUST00000192612 1094 ntBASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Chd4Q6PDQ2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Chd4Q6PDQ2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms