Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Abcf1Q6P542 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Gm43060-201ENSMUST00000200621 289 ntBASIC20.78■□□□□ 0.92
Abcf1Q6P542 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcf1Q6P542 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.78■□□□□ 0.92
Abcf1Q6P542 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.77■□□□□ 0.92
Abcf1Q6P542 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Abcf1Q6P542 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.76■□□□□ 0.91
Abcf1Q6P542 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Gm40848-201ENSMUST00000221998 324 ntBASIC20.76■□□□□ 0.91
Abcf1Q6P542 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcf1Q6P542 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.75■□□□□ 0.91
Abcf1Q6P542 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Gm11421-201ENSMUST00000122124 294 ntBASIC20.75■□□□□ 0.91
Abcf1Q6P542 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcf1Q6P542 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Abcf1Q6P542 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcf1Q6P542 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abcf1Q6P542 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abcf1Q6P542 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.72■□□□□ 0.91
Abcf1Q6P542 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.72■□□□□ 0.91
Abcf1Q6P542 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abcf1Q6P542 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Abcf1Q6P542 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abcf1Q6P542 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Abcf1Q6P542 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms