Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pds5aQ6A026 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pds5aQ6A026 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.05■□□□□ 0.8
Pds5aQ6A026 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.05■□□□□ 0.8
Pds5aQ6A026 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pds5aQ6A026 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pds5aQ6A026 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.04■□□□□ 0.8
Pds5aQ6A026 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pds5aQ6A026 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.03■□□□□ 0.8
Pds5aQ6A026 Gm26524-201ENSMUST00000192339 390 ntBASIC20.03■□□□□ 0.8
Pds5aQ6A026 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.03■□□□□ 0.8
Pds5aQ6A026 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.03■□□□□ 0.8
Pds5aQ6A026 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.03■□□□□ 0.8
Pds5aQ6A026 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pds5aQ6A026 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.02■□□□□ 0.8
Pds5aQ6A026 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pds5aQ6A026 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pds5aQ6A026 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.02■□□□□ 0.79
Pds5aQ6A026 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pds5aQ6A026 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.01■□□□□ 0.79
Pds5aQ6A026 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pds5aQ6A026 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20■□□□□ 0.79
Pds5aQ6A026 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pds5aQ6A026 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pds5aQ6A026 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pds5aQ6A026 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms