Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.9■□□□□ 0.78
Six2Q62232 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.9■□□□□ 0.78
Six2Q62232 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Six2Q62232 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.9■□□□□ 0.78
Six2Q62232 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Six2Q62232 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six2Q62232 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.89■□□□□ 0.77
Six2Q62232 Gm10033-202ENSMUST00000211874 928 ntBASIC19.89■□□□□ 0.77
Six2Q62232 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six2Q62232 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six2Q62232 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Six2Q62232 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Six2Q62232 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Six2Q62232 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Six2Q62232 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.88■□□□□ 0.77
Six2Q62232 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.88■□□□□ 0.77
Six2Q62232 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.88■□□□□ 0.77
Six2Q62232 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six2Q62232 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Six2Q62232 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Six2Q62232 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.87■□□□□ 0.77
Six2Q62232 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Six2Q62232 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.87■□□□□ 0.77
Six2Q62232 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six2Q62232 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.86■□□□□ 0.77
Six2Q62232 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.86■□□□□ 0.77
Six2Q62232 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.86■□□□□ 0.77
Six2Q62232 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.86■□□□□ 0.77
Six2Q62232 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Six2Q62232 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.86■□□□□ 0.77
Six2Q62232 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Six2Q62232 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six2Q62232 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Six2Q62232 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.84■□□□□ 0.77
Six2Q62232 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Gm42778-201ENSMUST00000199644 553 ntBASIC19.84■□□□□ 0.77
Six2Q62232 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Six2Q62232 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six2Q62232 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Six2Q62232 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six2Q62232 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.83■□□□□ 0.77
Six2Q62232 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.83■□□□□ 0.77
Six2Q62232 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six2Q62232 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Six2Q62232 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.83■□□□□ 0.77
Six2Q62232 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six2Q62232 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Six2Q62232 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Six2Q62232 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six2Q62232 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.82■□□□□ 0.76
Six2Q62232 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.82■□□□□ 0.76
Six2Q62232 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Grk6-206ENSMUST00000224995 2971 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms