Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim21Q62191 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim21Q62191 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.59■□□□□ 0.73
Trim21Q62191 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim21Q62191 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim21Q62191 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Trim21Q62191 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim21Q62191 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim21Q62191 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trim21Q62191 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim21Q62191 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim21Q62191 Gm43060-201ENSMUST00000200621 289 ntBASIC19.58■□□□□ 0.72
Trim21Q62191 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim21Q62191 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Trim21Q62191 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim21Q62191 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim21Q62191 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim21Q62191 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim21Q62191 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim21Q62191 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim21Q62191 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.56■□□□□ 0.72
Trim21Q62191 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim21Q62191 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trim21Q62191 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim21Q62191 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.56■□□□□ 0.72
Trim21Q62191 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim21Q62191 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim21Q62191 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim21Q62191 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.55■□□□□ 0.72
Trim21Q62191 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim21Q62191 Gm38205-201ENSMUST00000192243 258 ntBASIC19.55■□□□□ 0.72
Trim21Q62191 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim21Q62191 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim21Q62191 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim21Q62191 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim21Q62191 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim21Q62191 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim21Q62191 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim21Q62191 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.54■□□□□ 0.72
Trim21Q62191 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim21Q62191 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim21Q62191 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim21Q62191 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim21Q62191 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim21Q62191 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.53■□□□□ 0.72
Trim21Q62191 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim21Q62191 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms