Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.92■■□□□ 1.1
Ctr9Q62018 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ctr9Q62018 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.92■■□□□ 1.1
Ctr9Q62018 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.92■■□□□ 1.1
Ctr9Q62018 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctr9Q62018 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctr9Q62018 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctr9Q62018 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ctr9Q62018 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctr9Q62018 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.91■■□□□ 1.1
Ctr9Q62018 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.91■■□□□ 1.1
Ctr9Q62018 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctr9Q62018 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ctr9Q62018 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ctr9Q62018 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctr9Q62018 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctr9Q62018 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ctr9Q62018 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.9■■□□□ 1.1
Ctr9Q62018 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ctr9Q62018 Gm10653-202ENSMUST00000139570 835 ntBASIC21.9■■□□□ 1.1
Ctr9Q62018 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ctr9Q62018 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ctr9Q62018 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ctr9Q62018 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ctr9Q62018 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ctr9Q62018 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ctr9Q62018 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ctr9Q62018 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.89■■□□□ 1.09
Ctr9Q62018 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.88■■□□□ 1.09
Ctr9Q62018 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.88■■□□□ 1.09
Ctr9Q62018 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.88■■□□□ 1.09
Ctr9Q62018 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.88■■□□□ 1.09
Ctr9Q62018 Gm20049-201ENSMUST00000219950 730 ntBASIC21.88■■□□□ 1.09
Ctr9Q62018 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.88■■□□□ 1.09
Ctr9Q62018 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ctr9Q62018 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.88■■□□□ 1.09
Ctr9Q62018 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.87■■□□□ 1.09
Ctr9Q62018 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ctr9Q62018 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctr9Q62018 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ctr9Q62018 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctr9Q62018 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctr9Q62018 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ctr9Q62018 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctr9Q62018 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.86■■□□□ 1.09
Ctr9Q62018 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.86■■□□□ 1.09
Ctr9Q62018 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ctr9Q62018 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.85■■□□□ 1.09
Ctr9Q62018 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.85■■□□□ 1.09
Ctr9Q62018 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.85■■□□□ 1.09
Ctr9Q62018 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctr9Q62018 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ctr9Q62018 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ctr9Q62018 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctr9Q62018 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.84■■□□□ 1.09
Ctr9Q62018 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ctr9Q62018 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctr9Q62018 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctr9Q62018 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ctr9Q62018 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctr9Q62018 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.83■■□□□ 1.09
Ctr9Q62018 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.83■■□□□ 1.09
Ctr9Q62018 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.83■■□□□ 1.09
Ctr9Q62018 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctr9Q62018 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ctr9Q62018 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ctr9Q62018 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ctr9Q62018 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms